Samsung NX1 has a 28.0MP APS-C (23.5 x 15.7 mm ) sized BSI-CMOS sensor and features DRIMe 5 processor. On the other hand, Pentax K-3 has a 24.0MP APS-C (23.5 x 15.6 mm ) sized CMOS sensor and features Prime III processor.
Another similarity between these two cameras is that both Pentax K-3 and Samsung NX1 sensors lack anti-alias (Low-Pass) filters. Removing anti-alias filter increases the sharpness and level of detail but at the same time, it increases the chance of moire occurring in certain scenes.
Below you can see the NX1 and K-3 sensor size comparison.
Samsung NX1 and Pentax K-3 have almost the same sensor size so none of them has any significant advantage over other in this area.